Package: TSDT 1.0.8

Brian Denton

TSDT: Treatment-Specific Subgroup Detection Tool

Implements a method for identifying subgroups with superior response relative to the overall sample.

Authors:Chakib Battioui [aut], Brian Denton [aut, cre], Lei Shen [ctb], Eli Lilly and Company [cph]

TSDT_1.0.8.tar.gz
TSDT_1.0.8.zip(r-4.5)TSDT_1.0.8.zip(r-4.4)TSDT_1.0.8.zip(r-4.3)
TSDT_1.0.8.tgz(r-4.4-any)TSDT_1.0.8.tgz(r-4.3-any)
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TSDT.pdf |TSDT.html✨
TSDT/json (API)

# Install 'TSDT' in R:
install.packages('TSDT', repos = c('https://elilillyco.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/elilillyco/cran_tsdt/issues

On CRAN:

2.78 score 60 scripts 170 downloads 38 exports 20 dependencies

Last updated 5 days agofrom:1736c44ced. Checks:7 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 09 2025
R-4.5-winOKJan 09 2025
R-4.5-linuxOKJan 09 2025
R-4.4-winOKJan 09 2025
R-4.4-macOKJan 09 2025
R-4.3-winOKJan 09 2025
R-4.3-macOKJan 09 2025

Exports:%nin%binary_transformbootstrapctree_wrappercutpointsdiff_mean_deviance_residualsdiff_quantile_responsediff_restricted_mean_survival_timediff_survival_time_quantiledistributionfoldsfunction_parameter_namesget_covariatesget_cutpointsget_suggested_subgroupget_trtget_yhazard_ratiomean_deviance_residualsmean_responsemob_wrapperna2emptyparse_partyparse_rpartpartitionpermutationquantile_responsereset_factor_levelsrpart_nodesrpart_wrappersubgroupsubsamplesummarysurvival_time_quantiletreatment_effectTSDTunfactorunpack_args

Dependencies:codetoolscoinhashlatticelibcoinMASSMatrixmatrixStatsmlbenchmodeltoolsmultcompmvtnormpartyrpartsandwichstrucchangesurvivalsurvRM2TH.datazoo

Readme and manuals

Help Manual

Help pageTopics
%nin%%nin%
binary transformbinary_transform
bootstrapbootstrap
BootstrapBootstrap-class
BootstrapStatisticBootstrapStatistic-class
ctree_wrapperctree_wrapper
CTreeCTree-class
Get distribution of cutpoints for subgroups.cutpoints
diff_mean_deviance_residualsdiff_mean_deviance_residuals
diff_quantile_responsediff_quantile_response
diff_restricted_mean_survival_timediff_restricted_mean_survival_time
diff_survival_time_quantilediff_survival_time_quantile
distributiondistribution
foldsfolds
function_parameter_namesfunction_parameter_names
get_covariatesget_covariates
get_cutpointsget_cutpoints get_cutpoints,ANY-method get_cutpoints,TSDT-method get_cutpoints,TSDT_CutpointDistribution-method
get_suggested_subgroupget_suggested_subgroup
get_trtget_trt
get_yget_y
hazard_ratiohazard_ratio
mean_deviance_residualsmean_deviance_residuals
mean_responsemean_response
mob_wrappermob_wrapper
MOBMOB-class
na2emptyna2empty
parse_partyparse_party
parse_rpartparse_rpart
partitionpartition
permutationpermutation
quantile_responsequantile_response
reset_factor_levelsreset_factor_levels
rpart_nodesrpart_nodes
rpart_wrapperrpart_wrapper
subgroupsubgroup
subsamplesubsample
SubsampleSubsample-class
Summary function for class TSDT.summary,TSDT-method
survival_time_quantilesurvival_time_quantile
treatment_effecttreatment_effect
Treatment-Specific Subgroup Detection ToolTSDT
TSDT_CutpointDistributionTSDT_CutpointDistribution-class
TSDT_SampleTSDT_Sample-class
TSDTTSDT-class
unfactorunfactor
unpack_argsunpack_args